LC-MS Spectra Upload

Upload centroided LC-MS spectra (mzML, mzXML, CDF or mzData; one zip per spectrum, up to 200 MB each), with optional DDA or SWATH-DIA MS/MS spectra and a metadata file. Example metadata

Processing can take a while: guests can save the Create Bookmark URL link after submission to return later; registered users manage their projects from the left panel.

Please Select all LC-MS1 and MS2 spectral data, then click Upload to start uploading. Once the uploading has completed, click Proceed to continue.
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Try our example data
Quick Demo (MS1)
A small example dataset for demo purposes, containing 10 spectra (UPLC-Q/E-ESI-, C18) organized into three groups (Healthy, Crohn's Disease and QC) from Lloyd-Price et al.
Malaria Data (MS1)
An experimental Malaria metabolomics dataset (UPLC-Q/E-ESI+, HILIC) between two immune status (Native vs. Semi-immune) from Li et al. 15 samples (12 Samples and 3 QCs) are included.
Blood Samples (MS1+DDA)
An whole blood metabolomics dataset (UPLC-Q/E-ESI+, HILIC, Pang et al.) among three blood types. DDA MS/MS file included. A total of 30 samples (serum, plasma and whole blood samples (n=6 for each), 6 QCs and 6 DDA MS/MS samples) are included.
COVID-19 dataset (MS1+SWATH-DIA)
An clinical metabolomics dataset (UPLC-TripleTOF 5600+, AB Sciex, ESI-, Acquity XSelect HSS T3 column) between control and COVID patients from Mahmoud S. et al. 16 samples (12 MS1 Samples and 4 SWATH-DIA files) are included.
E-Waste dataset (MS1+DDA)
An exposomics dataset (UPLC-Q/E-ESI-, C18 column), including blood samples from e-waste workers from Pang et al. 19 samples (16 MS1 Samples and 3 MS2-DDA files) are included.