External RequestsMetaboAnalyst now accepts compound lists for ID conversion. Please use the API defined below: POST mapcompounds
https://rest.xialab.ca/api/mapcompounds
Headers
Content-Type application/json
Body raw (application/json
{
The different options for input.type are given below: name - Compound name (e.g., 1,3-Diaminopropane) hmdb - Human Metabolome Database (e.g., HMDB0000002) pubchem - PubChem Substance and Compound databases(e.g., 428) chebi - Chemical Entities of Biological Interest(e.g., 15725) metlin - Metabolite and Chemical Entity Database (e.g., 5081) kegg - KEGG COMPOUND Database (e.g., C00986) A list of examples for calling mapcompounds using several programming languages is shown below: JavaScript Jquery AJAX var settings = { "async": true, "crossDomain": true, "url": "https://rest.xialab.ca/api/mapcompounds", "method": "POST", "headers": { "Content-Type": "application/json", "cache-control": "no-cache" }, "processData": false, "data": "{\n\t\"queryList\": \"1,3-Diaminopropane;2-Ketobutyric acid;2-Hydroxybutyric acid;\",\n\t\"inputType\": \"name\"\n}" } $.ajax(settings).done(function (response) { console.log(response); }); cURL (command line) curl -X POST \ https://rest.xialab.ca/api/mapcompounds \ -H 'Content-Type: application/json' \ -H 'cache-control: no-cache' \ -d '{ "queryList": "1,3-Diaminopropane;2-Ketobutyric acid;2-Hydroxybutyric acid;", "inputType": "name" }' Java Unirest HttpResponse<String> response = Unirest.post("https://rest.xialab.ca/api/mapcompounds") .header("Content-Type", "application/json") .header("cache-control", "no-cache") .body("{\n\t\"queryList\": \"1,3-Diaminopropane;2-Ketobutyric acid;2-Hydroxybutyric acid;\",\n\t\"inputType\": \"name\"\n}") .asString(); Python Requests import requests url = "https://rest.xialab.ca/api/mapcompounds" payload = "{\n\t\"queryList\": \"1,3-Diaminopropane;2-Ketobutyric acid;2-Hydroxybutyric acid;\",\n\t\"inputType\": \"name\"\n}" headers = { 'Content-Type': "application/json", 'cache-control': "no-cache", } response = requests.request("POST", url, data=payload, headers=headers) print(response.text) |
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